Cluster: HRGMv2_1900_CGC36
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_1900
- CGC Family ID: CGCFAM_07428
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_1900_48 | HRGMv2_1900_48_21 | 16445 | 17776 | - | 2.A.66.1.28 |
| pfam | HRGMv2_1900_48 | HRGMv2_1900_48_22 | 17814 | 18119 | - | zf-like |
| CAZyme | HRGMv2_1900_48 | HRGMv2_1900_48_23 | 18103 | 19425 | - | GH32 |
Gene ID: HRGMv2_1900_48_21
Type: TC
Location: 16445 - 17776 (-)
Type: TC
Location: 16445 - 17776 (-)
Gene ID: HRGMv2_1900_48_22
Type: pfam
Location: 17814 - 18119 (-)
Type: pfam
Location: 17814 - 18119 (-)
Gene ID: HRGMv2_1900_48_23
Type: CAZyme
Location: 18103 - 19425 (-)
Type: CAZyme
Location: 18103 - 19425 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Coprobacillaceae
Genus
Faecalibacillus
Species
Faecalibacillus sp900544435
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_1900_48_21 | vegan > omnivore | 2.07684 | 0.00186 |
| HRGMv2_1900_48_22 | vegan > omnivore | 3.89671 | 0.00186 |
| HRGMv2_1900_48_23 | vegan > omnivore | 1.69932 | 0.00186 |