Cluster: HRGMv2_1900_CGC35
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_1900
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_1900_44 | HRGMv2_1900_44_24 | 19046 | 20044 | - | GT2 |
| TC | HRGMv2_1900_44 | HRGMv2_1900_44_25 | 20203 | 21225 | + | 2.A.98.1.4 |
| TC | HRGMv2_1900_44 | HRGMv2_1900_44_26 | 21322 | 23001 | + | 2.A.58.2.2 |
Gene ID: HRGMv2_1900_44_24
Type: CAZyme
Location: 19046 - 20044 (-)
Type: CAZyme
Location: 19046 - 20044 (-)
Gene ID: HRGMv2_1900_44_25
Type: TC
Location: 20203 - 21225 (+)
Type: TC
Location: 20203 - 21225 (+)
Gene ID: HRGMv2_1900_44_26
Type: TC
Location: 21322 - 23001 (+)
Type: TC
Location: 21322 - 23001 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Coprobacillaceae
Genus
Faecalibacillus
Species
Faecalibacillus sp900544435
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_1900_44_24 | vegan > omnivore | 1.29346 | 0.00186 |
| HRGMv2_1900_44_25 | vegan > omnivore | 1.07154 | 0.00186 |
| HRGMv2_1900_44_26 | vegan > omnivore | 1.25060 | 0.00186 |