Cluster: HRGMv2_1900_CGC34
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_1900
- CGC Family ID: CGCFAM_04901
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_1900_39 | HRGMv2_1900_39_9 | 7116 | 8291 | + | CE4 |
| NULL(UNKNOWN) | HRGMv2_1900_39 | HRGMv2_1900_39_10 | 8304 | 8582 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_1900_39 | HRGMv2_1900_39_11 | 9015 | 10715 | + | 2.A.114.1.3 |
| TF | HRGMv2_1900_39 | HRGMv2_1900_39_12 | 10845 | 11288 | + | Fe_dep_repress |
| TC | HRGMv2_1900_39 | HRGMv2_1900_39_13 | 11288 | 12634 | + | 2.A.66.1.28 |
Gene ID: HRGMv2_1900_39_9
Type: CAZyme
Location: 7116 - 8291 (+)
Type: CAZyme
Location: 7116 - 8291 (+)
Gene ID: HRGMv2_1900_39_10
Type:
Location: 8304 - 8582 (-)
Type:
Location: 8304 - 8582 (-)
Gene ID: HRGMv2_1900_39_11
Type: TC
Location: 9015 - 10715 (+)
Type: TC
Location: 9015 - 10715 (+)
Gene ID: HRGMv2_1900_39_12
Type: TF
Location: 10845 - 11288 (+)
Type: TF
Location: 10845 - 11288 (+)
Gene ID: HRGMv2_1900_39_13
Type: TC
Location: 11288 - 12634 (+)
Type: TC
Location: 11288 - 12634 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Coprobacillaceae
Genus
Faecalibacillus
Species
Faecalibacillus sp900544435
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_1900_39_11 | vegetarian > omnivore | 1.15605 | 0.02014 |
| HRGMv2_1900_39_12 | vegan > omnivore | 2.09254 | 0.00186 |