Cluster: HRGMv2_1900_CGC31
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_1900
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_1900_34 | HRGMv2_1900_34_28 | 25663 | 27135 | + | GH1 |
| pfam | HRGMv2_1900_34 | HRGMv2_1900_34_29 | 27213 | 28346 | + | Aminotran_5 |
| pfam | HRGMv2_1900_34 | HRGMv2_1900_34_30 | 28333 | 29157 | + | ATP_bind_3 |
| TC | HRGMv2_1900_34 | HRGMv2_1900_34_31 | 29147 | 29821 | + | 2.A.78.1.1 |
Gene ID: HRGMv2_1900_34_28
Type: CAZyme
Location: 25663 - 27135 (+)
Type: CAZyme
Location: 25663 - 27135 (+)
Gene ID: HRGMv2_1900_34_29
Type: pfam
Location: 27213 - 28346 (+)
Type: pfam
Location: 27213 - 28346 (+)
Gene ID: HRGMv2_1900_34_30
Type: pfam
Location: 28333 - 29157 (+)
Type: pfam
Location: 28333 - 29157 (+)
Gene ID: HRGMv2_1900_34_31
Type: TC
Location: 29147 - 29821 (+)
Type: TC
Location: 29147 - 29821 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Coprobacillaceae
Genus
Faecalibacillus
Species
Faecalibacillus sp900544435
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_1900_34_29 | vegan > omnivore | 1.37325 | 0.00186 |
| HRGMv2_1900_34_30 | vegan > omnivore | 2.12311 | 0.00186 |
| HRGMv2_1900_34_31 | vegan > omnivore | 3.83815 | 0.00186 |