Cluster: HRGMv2_1900_CGC24
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate: beta-mannan
- Genome ID: HRGMv2_1900
- CGC Family ID: CGCFAM_00066
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_1900_21 | HRGMv2_1900_21_43 | 41399 | 41713 | + | 4.A.3.2.8 |
| CAZyme | HRGMv2_1900_21 | HRGMv2_1900_21_44 | 41715 | 43190 | + | GH1 |
| TC | HRGMv2_1900_21 | HRGMv2_1900_21_45 | 43193 | 43432 | + | 2.A.123.2.4 |
Gene ID: HRGMv2_1900_21_43
Type: TC
Location: 41399 - 41713 (+)
Type: TC
Location: 41399 - 41713 (+)
Gene ID: HRGMv2_1900_21_44
Type: CAZyme
Location: 41715 - 43190 (+)
Type: CAZyme
Location: 41715 - 43190 (+)
Gene ID: HRGMv2_1900_21_45
Type: TC
Location: 43193 - 43432 (+)
Type: TC
Location: 43193 - 43432 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Coprobacillaceae
Genus
Faecalibacillus
Species
Faecalibacillus sp900544435
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.