Cluster: HRGMv2_1900_CGC2
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_1900
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_1900_3 | HRGMv2_1900_3_44 | 44552 | 45373 | + | 1.A.23.7.2 |
| NULL(UNKNOWN) | HRGMv2_1900_3 | HRGMv2_1900_3_45 | 45590 | 45772 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_1900_3 | HRGMv2_1900_3_46 | 45884 | 47926 | - | GH31_1 |
| TF | HRGMv2_1900_3 | HRGMv2_1900_3_47 | 48041 | 48940 | + | HTH_AraC | HTH_AraC |
| TC | HRGMv2_1900_3 | HRGMv2_1900_3_48 | 49088 | 50362 | + | 4.A.3.2.6 |
Gene ID: HRGMv2_1900_3_44
Type: TC
Location: 44552 - 45373 (+)
Type: TC
Location: 44552 - 45373 (+)
Gene ID: HRGMv2_1900_3_45
Type:
Location: 45590 - 45772 (+)
Type:
Location: 45590 - 45772 (+)
Gene ID: HRGMv2_1900_3_46
Type: CAZyme
Location: 45884 - 47926 (-)
Type: CAZyme
Location: 45884 - 47926 (-)
Gene ID: HRGMv2_1900_3_47
Type: TF
Location: 48041 - 48940 (+)
Type: TF
Location: 48041 - 48940 (+)
Gene ID: HRGMv2_1900_3_48
Type: TC
Location: 49088 - 50362 (+)
Type: TC
Location: 49088 - 50362 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Coprobacillaceae
Genus
Faecalibacillus
Species
Faecalibacillus sp900544435
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_1900_3_44 | vegan > omnivore | 1.84542 | 0.00186 |