Cluster: HRGMv2_1900_CGC16
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate: host glycan/beta-glucan
- Genome ID: HRGMv2_1900
- CGC Family ID: CGCFAM_00012
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_1900_11 | HRGMv2_1900_11_23 | 16868 | 17176 | - | 4.A.3.2.2 |
| CAZyme | HRGMv2_1900_11 | HRGMv2_1900_11_24 | 17192 | 18613 | - | GH1 |
| CAZyme | HRGMv2_1900_11 | HRGMv2_1900_11_25 | 18858 | 20258 | - | GH1 |
| TC | HRGMv2_1900_11 | HRGMv2_1900_11_26 | 20401 | 22335 | - | 3.A.9.1.2 |
Gene ID: HRGMv2_1900_11_23
Type: TC
Location: 16868 - 17176 (-)
Type: TC
Location: 16868 - 17176 (-)
Gene ID: HRGMv2_1900_11_24
Type: CAZyme
Location: 17192 - 18613 (-)
Type: CAZyme
Location: 17192 - 18613 (-)
Gene ID: HRGMv2_1900_11_25
Type: CAZyme
Location: 18858 - 20258 (-)
Type: CAZyme
Location: 18858 - 20258 (-)
Gene ID: HRGMv2_1900_11_26
Type: TC
Location: 20401 - 22335 (-)
Type: TC
Location: 20401 - 22335 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Coprobacillaceae
Genus
Faecalibacillus
Species
Faecalibacillus sp900544435
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_1900_11_25 | vegan > omnivore | 1.92156 | 0.00186 |