Cluster: HRGMv2_1900_CGC15
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate: host glycan/beta-glucan
- Genome ID: HRGMv2_1900
- CGC Family ID: CGCFAM_00020
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_1900_11 | HRGMv2_1900_11_2 | 1140 | 2312 | - | GH170 |
| TC | HRGMv2_1900_11 | HRGMv2_1900_11_3 | 2328 | 3722 | - | 4.A.1.2.11 |
| pfam | HRGMv2_1900_11 | HRGMv2_1900_11_4 | 3817 | 4500 | - | PRD | PRD |
| pfam | HRGMv2_1900_11 | HRGMv2_1900_11_5 | 4521 | 4673 | - | CAT_RBD |
| TC | HRGMv2_1900_11 | HRGMv2_1900_11_6 | 4689 | 5060 | - | 4.A.1.1.13 |
Gene ID: HRGMv2_1900_11_2
Type: CAZyme
Location: 1140 - 2312 (-)
Type: CAZyme
Location: 1140 - 2312 (-)
Gene ID: HRGMv2_1900_11_3
Type: TC
Location: 2328 - 3722 (-)
Type: TC
Location: 2328 - 3722 (-)
Gene ID: HRGMv2_1900_11_4
Type: pfam
Location: 3817 - 4500 (-)
Type: pfam
Location: 3817 - 4500 (-)
Gene ID: HRGMv2_1900_11_5
Type: pfam
Location: 4521 - 4673 (-)
Type: pfam
Location: 4521 - 4673 (-)
Gene ID: HRGMv2_1900_11_6
Type: TC
Location: 4689 - 5060 (-)
Type: TC
Location: 4689 - 5060 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Coprobacillaceae
Genus
Faecalibacillus
Species
Faecalibacillus sp900544435
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.