Cluster: HRGMv2_1900_CGC13
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_1900
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_1900_10 | HRGMv2_1900_10_3 | 2035 | 3351 | + | 4.A.3.2.3 |
| TF | HRGMv2_1900_10 | HRGMv2_1900_10_4 | 3711 | 4472 | - | HTH_6 |
| TF | HRGMv2_1900_10 | HRGMv2_1900_10_5 | 4563 | 5435 | - | HTH_1 |
| TC | HRGMv2_1900_10 | HRGMv2_1900_10_6 | 5557 | 6543 | - | 8.A.5.1.6 |
| CAZyme | HRGMv2_1900_10 | HRGMv2_1900_10_7 | 6558 | 8024 | - | GH1 |
| pfam | HRGMv2_1900_10 | HRGMv2_1900_10_8 | 8037 | 8450 | - | HbpS-like |
| pfam | HRGMv2_1900_10 | HRGMv2_1900_10_9 | 8550 | 9365 | - | Lactamase_B_2 | Lactamase_B_3 |
| TC | HRGMv2_1900_10 | HRGMv2_1900_10_10 | 9531 | 10805 | + | 2.A.85.4.3 |
Gene ID: HRGMv2_1900_10_3
Type: TC
Location: 2035 - 3351 (+)
Type: TC
Location: 2035 - 3351 (+)
Gene ID: HRGMv2_1900_10_4
Type: TF
Location: 3711 - 4472 (-)
Type: TF
Location: 3711 - 4472 (-)
Gene ID: HRGMv2_1900_10_5
Type: TF
Location: 4563 - 5435 (-)
Type: TF
Location: 4563 - 5435 (-)
Gene ID: HRGMv2_1900_10_6
Type: TC
Location: 5557 - 6543 (-)
Type: TC
Location: 5557 - 6543 (-)
Gene ID: HRGMv2_1900_10_7
Type: CAZyme
Location: 6558 - 8024 (-)
Type: CAZyme
Location: 6558 - 8024 (-)
Gene ID: HRGMv2_1900_10_8
Type: pfam
Location: 8037 - 8450 (-)
Type: pfam
Location: 8037 - 8450 (-)
Gene ID: HRGMv2_1900_10_9
Type: pfam
Location: 8550 - 9365 (-)
Type: pfam
Location: 8550 - 9365 (-)
Gene ID: HRGMv2_1900_10_10
Type: TC
Location: 9531 - 10805 (+)
Type: TC
Location: 9531 - 10805 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Coprobacillaceae
Genus
Faecalibacillus
Species
Faecalibacillus sp900544435
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.