Cluster: HRGMv2_1900_CGC10
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_1900
- CGC Family ID: CGCFAM_01181
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_1900_7 | HRGMv2_1900_7_43 | 40374 | 41468 | + | CE1 |
| TF | HRGMv2_1900_7 | HRGMv2_1900_7_44 | 41687 | 42094 | - | MerR |
| TC | HRGMv2_1900_7 | HRGMv2_1900_7_45 | 42213 | 43184 | + | 8.A.5.1.6 |
| TF | HRGMv2_1900_7 | HRGMv2_1900_7_46 | 43186 | 43521 | + | MerR |
| CAZyme | HRGMv2_1900_7 | HRGMv2_1900_7_47 | 43523 | 45007 | + | GH1 |
Gene ID: HRGMv2_1900_7_43
Type: CAZyme
Location: 40374 - 41468 (+)
Type: CAZyme
Location: 40374 - 41468 (+)
Gene ID: HRGMv2_1900_7_44
Type: TF
Location: 41687 - 42094 (-)
Type: TF
Location: 41687 - 42094 (-)
Gene ID: HRGMv2_1900_7_45
Type: TC
Location: 42213 - 43184 (+)
Type: TC
Location: 42213 - 43184 (+)
Gene ID: HRGMv2_1900_7_46
Type: TF
Location: 43186 - 43521 (+)
Type: TF
Location: 43186 - 43521 (+)
Gene ID: HRGMv2_1900_7_47
Type: CAZyme
Location: 43523 - 45007 (+)
Type: CAZyme
Location: 43523 - 45007 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Coprobacillaceae
Genus
Faecalibacillus
Species
Faecalibacillus sp900544435
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.