Cluster: HRGMv2_1895_CGC6
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_1895
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_1895_14 | HRGMv2_1895_14_1 | 221 | 1411 | + | GH88 |
| TC | HRGMv2_1895_14 | HRGMv2_1895_14_2 | 1430 | 1921 | + | 4.A.6.1.14 |
| TC | HRGMv2_1895_14 | HRGMv2_1895_14_3 | 1935 | 2717 | + | 4.A.6.1.14 |
| TC | HRGMv2_1895_14 | HRGMv2_1895_14_4 | 2704 | 3519 | + | 4.A.6.1.14 |
| CAZyme | HRGMv2_1895_14 | HRGMv2_1895_14_5 | 3569 | 5443 | + | PL12_1 |
Gene ID: HRGMv2_1895_14_1
Type: CAZyme
Location: 221 - 1411 (+)
Type: CAZyme
Location: 221 - 1411 (+)
Gene ID: HRGMv2_1895_14_2
Type: TC
Location: 1430 - 1921 (+)
Type: TC
Location: 1430 - 1921 (+)
Gene ID: HRGMv2_1895_14_3
Type: TC
Location: 1935 - 2717 (+)
Type: TC
Location: 1935 - 2717 (+)
Gene ID: HRGMv2_1895_14_4
Type: TC
Location: 2704 - 3519 (+)
Type: TC
Location: 2704 - 3519 (+)
Gene ID: HRGMv2_1895_14_5
Type: CAZyme
Location: 3569 - 5443 (+)
Type: CAZyme
Location: 3569 - 5443 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Holdemanella
Species
Holdemanella sp900547815
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.