Cluster: HRGMv2_1895_CGC15
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_1895
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_1895_91 | HRGMv2_1895_91_1 | 1 | 1287 | - | 3.A.5.1.1 |
| NULL(UNKNOWN) | HRGMv2_1895_91 | HRGMv2_1895_91_2 | 1320 | 1823 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_1895_91 | HRGMv2_1895_91_3 | 1808 | 2740 | - | GT2 |
Gene ID: HRGMv2_1895_91_1
Type: TC
Location: 1 - 1287 (-)
Type: TC
Location: 1 - 1287 (-)
Gene ID: HRGMv2_1895_91_2
Type:
Location: 1320 - 1823 (-)
Type:
Location: 1320 - 1823 (-)
Gene ID: HRGMv2_1895_91_3
Type: CAZyme
Location: 1808 - 2740 (-)
Type: CAZyme
Location: 1808 - 2740 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Holdemanella
Species
Holdemanella sp900547815
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_1895_91_1 | vegetarian > vegan | 1.55052 | 0.04656 |