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Cluster: HRGMv2_1895_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1895_21 HRGMv2_1895_21_20 21960 23429 + GH77
pfam HRGMv2_1895_21 HRGMv2_1895_21_21 23718 26468 + Sigma54_activat | PRD | EIIA-man
pfam HRGMv2_1895_21 HRGMv2_1895_21_22 26455 27291 + AP_endonuc_2
TC HRGMv2_1895_21 HRGMv2_1895_21_23 27291 27701 + 4.A.6.1.19
TC HRGMv2_1895_21 HRGMv2_1895_21_24 27713 28183 + 4.A.6.1.19
TC HRGMv2_1895_21 HRGMv2_1895_21_25 28211 28987 + 4.A.6.1.19
TC HRGMv2_1895_21 HRGMv2_1895_21_26 28974 29795 + 4.A.6.1.19
Gene ID: HRGMv2_1895_21_20
Type: CAZyme
Location: 21960 - 23429 (+)
Gene ID: HRGMv2_1895_21_21
Type: pfam
Location: 23718 - 26468 (+)
Gene ID: HRGMv2_1895_21_22
Type: pfam
Location: 26455 - 27291 (+)
Gene ID: HRGMv2_1895_21_23
Type: TC
Location: 27291 - 27701 (+)
Gene ID: HRGMv2_1895_21_24
Type: TC
Location: 27713 - 28183 (+)
Gene ID: HRGMv2_1895_21_25
Type: TC
Location: 28211 - 28987 (+)
Gene ID: HRGMv2_1895_21_26
Type: TC
Location: 28974 - 29795 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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