Cluster: HRGMv2_1895_CGC10
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_1895
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_1895_16 | HRGMv2_1895_16_2 | 342 | 1676 | - | 2.A.66.1.33 |
| pfam | HRGMv2_1895_16 | HRGMv2_1895_16_3 | 1714 | 2655 | - | Ldh_1_N | Ldh_1_C |
| TC | HRGMv2_1895_16 | HRGMv2_1895_16_4 | 2667 | 4025 | - | 2.A.22.5.3 |
| CAZyme | HRGMv2_1895_16 | HRGMv2_1895_16_5 | 4022 | 4807 | - | GT8 |
Gene ID: HRGMv2_1895_16_2
Type: TC
Location: 342 - 1676 (-)
Type: TC
Location: 342 - 1676 (-)
Gene ID: HRGMv2_1895_16_3
Type: pfam
Location: 1714 - 2655 (-)
Type: pfam
Location: 1714 - 2655 (-)
Gene ID: HRGMv2_1895_16_4
Type: TC
Location: 2667 - 4025 (-)
Type: TC
Location: 2667 - 4025 (-)
Gene ID: HRGMv2_1895_16_5
Type: CAZyme
Location: 4022 - 4807 (-)
Type: CAZyme
Location: 4022 - 4807 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Holdemanella
Species
Holdemanella sp900547815
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.