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Cluster: HRGMv2_1881_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1881_2 HRGMv2_1881_2_41 43154 43954 + 3.A.1.13.1
TC HRGMv2_1881_2 HRGMv2_1881_2_42 43969 44592 + 1.A.62.2.2
pfam HRGMv2_1881_2 HRGMv2_1881_2_43 44634 44978 - Fe-S_biosyn
TC HRGMv2_1881_2 HRGMv2_1881_2_44 45060 46394 - 2.A.49.5.5
pfam HRGMv2_1881_2 HRGMv2_1881_2_45 46635 47915 + Aminotran_3
TC HRGMv2_1881_2 HRGMv2_1881_2_46 48027 50009 - 3.A.1.14.3
TC HRGMv2_1881_2 HRGMv2_1881_2_47 50006 50896 - 3.A.1.14.3
TC HRGMv2_1881_2 HRGMv2_1881_2_48 50896 51693 - 3.A.1.14.3
TC HRGMv2_1881_2 HRGMv2_1881_2_49 51743 53992 - 1.B.14.1.2
CAZyme HRGMv2_1881_2 HRGMv2_1881_2_50 54245 56767 - GT51
Gene ID: HRGMv2_1881_2_41
Type: TC
Location: 43154 - 43954 (+)
Gene ID: HRGMv2_1881_2_42
Type: TC
Location: 43969 - 44592 (+)
Gene ID: HRGMv2_1881_2_43
Type: pfam
Location: 44634 - 44978 (-)
Gene ID: HRGMv2_1881_2_44
Type: TC
Location: 45060 - 46394 (-)
Gene ID: HRGMv2_1881_2_45
Type: pfam
Location: 46635 - 47915 (+)
Gene ID: HRGMv2_1881_2_46
Type: TC
Location: 48027 - 50009 (-)
Gene ID: HRGMv2_1881_2_47
Type: TC
Location: 50006 - 50896 (-)
Gene ID: HRGMv2_1881_2_48
Type: TC
Location: 50896 - 51693 (-)
Gene ID: HRGMv2_1881_2_49
Type: TC
Location: 51743 - 53992 (-)
Gene ID: HRGMv2_1881_2_50
Type: CAZyme
Location: 54245 - 56767 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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