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Cluster: HRGMv2_1881_CGC74

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1881_43 HRGMv2_1881_43_8 7160 7522 - 4.A.4.1.1
TC HRGMv2_1881_43 HRGMv2_1881_43_9 7533 8492 - 4.A.4.1.1
TC HRGMv2_1881_43 HRGMv2_1881_43_10 8489 9049 - 4.A.4.1.1
CAZyme HRGMv2_1881_43 HRGMv2_1881_43_11 9320 10402 + GH103
NULL(UNKNOWN) HRGMv2_1881_43 HRGMv2_1881_43_12 10522 10632 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_1881_43 HRGMv2_1881_43_13 10629 11291 + 3.A.1.15.10
TC HRGMv2_1881_43 HRGMv2_1881_43_14 11288 12151 + 3.A.1.15.10
TC HRGMv2_1881_43 HRGMv2_1881_43_15 12163 13041 + 3.A.1.15.10
Gene ID: HRGMv2_1881_43_8
Type: TC
Location: 7160 - 7522 (-)
Gene ID: HRGMv2_1881_43_9
Type: TC
Location: 7533 - 8492 (-)
Gene ID: HRGMv2_1881_43_10
Type: TC
Location: 8489 - 9049 (-)
Gene ID: HRGMv2_1881_43_11
Type: CAZyme
Location: 9320 - 10402 (+)
Gene ID: HRGMv2_1881_43_12
Type:
Location: 10522 - 10632 (+)
Gene ID: HRGMv2_1881_43_13
Type: TC
Location: 10629 - 11291 (+)
Gene ID: HRGMv2_1881_43_14
Type: TC
Location: 11288 - 12151 (+)
Gene ID: HRGMv2_1881_43_15
Type: TC
Location: 12163 - 13041 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_1881_43_10 vegetarian > vegan 1.59199 0.02017

🧭 Explore Read Mapping of CGC

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