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Cluster: HRGMv2_1881_CGC71

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1881_38 HRGMv2_1881_38_2 757 1092 - 2.A.113.1.1
pfam HRGMv2_1881_38 HRGMv2_1881_38_3 1289 2302 - ADH_zinc_N | ADH_N | ADH_zinc_N_2
TC HRGMv2_1881_38 HRGMv2_1881_38_4 2452 3564 - 3.A.1.1.4
TC HRGMv2_1881_38 HRGMv2_1881_38_5 3907 5142 + 3.A.1.1.2
TC HRGMv2_1881_38 HRGMv2_1881_38_6 5200 6507 + 3.A.1.1.2
TC HRGMv2_1881_38 HRGMv2_1881_38_7 6517 7368 + 3.A.1.1.2
CAZyme HRGMv2_1881_38 HRGMv2_1881_38_8 7373 8560 + GH53
CAZyme HRGMv2_1881_38 HRGMv2_1881_38_9 8591 10648 + GH42
TC HRGMv2_1881_38 HRGMv2_1881_38_10 10714 11025 + 4.A.1.1.1
TC HRGMv2_1881_38 HRGMv2_1881_38_11 11168 12433 - 1.B.3.1.1
Gene ID: HRGMv2_1881_38_2
Type: TC
Location: 757 - 1092 (-)
Gene ID: HRGMv2_1881_38_3
Type: pfam
Location: 1289 - 2302 (-)
Gene ID: HRGMv2_1881_38_4
Type: TC
Location: 2452 - 3564 (-)
Gene ID: HRGMv2_1881_38_5
Type: TC
Location: 3907 - 5142 (+)
Gene ID: HRGMv2_1881_38_6
Type: TC
Location: 5200 - 6507 (+)
Gene ID: HRGMv2_1881_38_7
Type: TC
Location: 6517 - 7368 (+)
Gene ID: HRGMv2_1881_38_8
Type: CAZyme
Location: 7373 - 8560 (+)
Gene ID: HRGMv2_1881_38_9
Type: CAZyme
Location: 8591 - 10648 (+)
Gene ID: HRGMv2_1881_38_10
Type: TC
Location: 10714 - 11025 (+)
Gene ID: HRGMv2_1881_38_11
Type: TC
Location: 11168 - 12433 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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