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Cluster: HRGMv2_1881_CGC69

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1881_30 HRGMv2_1881_30_12 10861 11556 - 9.B.149.1.7
pfam HRGMv2_1881_30 HRGMv2_1881_30_13 11559 12497 - DUF2167
TC HRGMv2_1881_30 HRGMv2_1881_30_14 12677 14146 - 3.A.1.30.1
TF HRGMv2_1881_30 HRGMv2_1881_30_15 14214 15002 - HTH_1
TC HRGMv2_1881_30 HRGMv2_1881_30_16 15109 15300 + 2.A.6.2.49
TC HRGMv2_1881_30 HRGMv2_1881_30_17 15478 16254 + 3.A.1.8.1
TC HRGMv2_1881_30 HRGMv2_1881_30_18 16251 16940 + 3.A.1.8.1
TC HRGMv2_1881_30 HRGMv2_1881_30_19 16944 18002 + 3.A.1.8.1
pfam HRGMv2_1881_30 HRGMv2_1881_30_20 18003 18821 - Hydrolase | S6PP | Hydrolase_3
pfam HRGMv2_1881_30 HRGMv2_1881_30_21 18977 19972 + Lactonase
CAZyme HRGMv2_1881_30 HRGMv2_1881_30_22 20042 21325 - CE8
Gene ID: HRGMv2_1881_30_12
Type: TC
Location: 10861 - 11556 (-)
Gene ID: HRGMv2_1881_30_13
Type: pfam
Location: 11559 - 12497 (-)
Gene ID: HRGMv2_1881_30_14
Type: TC
Location: 12677 - 14146 (-)
Gene ID: HRGMv2_1881_30_15
Type: TF
Location: 14214 - 15002 (-)
Gene ID: HRGMv2_1881_30_16
Type: TC
Location: 15109 - 15300 (+)
Gene ID: HRGMv2_1881_30_17
Type: TC
Location: 15478 - 16254 (+)
Gene ID: HRGMv2_1881_30_18
Type: TC
Location: 16251 - 16940 (+)
Gene ID: HRGMv2_1881_30_19
Type: TC
Location: 16944 - 18002 (+)
Gene ID: HRGMv2_1881_30_20
Type: pfam
Location: 18003 - 18821 (-)
Gene ID: HRGMv2_1881_30_21
Type: pfam
Location: 18977 - 19972 (+)
Gene ID: HRGMv2_1881_30_22
Type: CAZyme
Location: 20042 - 21325 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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