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Cluster: HRGMv2_1881_CGC65

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1881_25 HRGMv2_1881_25_6 5495 7183 - 9.B.33.1.1
TF HRGMv2_1881_25 HRGMv2_1881_25_7 7403 8137 + MerR
NULL(UNKNOWN) HRGMv2_1881_25 HRGMv2_1881_25_8 8198 8311 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_1881_25 HRGMv2_1881_25_9 8286 9023 - 3.A.1.12.15
TC HRGMv2_1881_25 HRGMv2_1881_25_10 9007 9954 - 3.A.1.12.15
TC HRGMv2_1881_25 HRGMv2_1881_25_11 9947 11101 - 3.A.1.12.15
TC HRGMv2_1881_25 HRGMv2_1881_25_12 11108 12025 - 3.A.1.12.15
CAZyme HRGMv2_1881_25 HRGMv2_1881_25_13 12166 14463 - GH3
Gene ID: HRGMv2_1881_25_6
Type: TC
Location: 5495 - 7183 (-)
Gene ID: HRGMv2_1881_25_7
Type: TF
Location: 7403 - 8137 (+)
Gene ID: HRGMv2_1881_25_8
Type:
Location: 8198 - 8311 (+)
Gene ID: HRGMv2_1881_25_9
Type: TC
Location: 8286 - 9023 (-)
Gene ID: HRGMv2_1881_25_10
Type: TC
Location: 9007 - 9954 (-)
Gene ID: HRGMv2_1881_25_11
Type: TC
Location: 9947 - 11101 (-)
Gene ID: HRGMv2_1881_25_12
Type: TC
Location: 11108 - 12025 (-)
Gene ID: HRGMv2_1881_25_13
Type: CAZyme
Location: 12166 - 14463 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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