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Cluster: HRGMv2_1881_CGC45

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1881_11 HRGMv2_1881_11_24 23936 24742 + 3.A.1.24.5
TC HRGMv2_1881_11 HRGMv2_1881_11_25 24739 25530 + 3.A.1.24.5
TC HRGMv2_1881_11 HRGMv2_1881_11_26 25515 26186 + 3.A.1.24.5
TC HRGMv2_1881_11 HRGMv2_1881_11_27 26188 27558 - 4.A.1.2.11
pfam HRGMv2_1881_11 HRGMv2_1881_11_28 27836 29035 + MR_MLE_N | MR_MLE_C
TF HRGMv2_1881_11 HRGMv2_1881_11_29 29037 29753 - GntR
CAZyme HRGMv2_1881_11 HRGMv2_1881_11_30 29859 32930 - GH2
Gene ID: HRGMv2_1881_11_24
Type: TC
Location: 23936 - 24742 (+)
Gene ID: HRGMv2_1881_11_25
Type: TC
Location: 24739 - 25530 (+)
Gene ID: HRGMv2_1881_11_26
Type: TC
Location: 25515 - 26186 (+)
Gene ID: HRGMv2_1881_11_27
Type: TC
Location: 26188 - 27558 (-)
Gene ID: HRGMv2_1881_11_28
Type: pfam
Location: 27836 - 29035 (+)
Gene ID: HRGMv2_1881_11_29
Type: TF
Location: 29037 - 29753 (-)
Gene ID: HRGMv2_1881_11_30
Type: CAZyme
Location: 29859 - 32930 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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