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Cluster: HRGMv2_1881_CGC34

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1881_7 HRGMv2_1881_7_101 106642 108849 + 3.A.3.6.2
pfam HRGMv2_1881_7 HRGMv2_1881_7_102 108846 109091 - TusA
TC HRGMv2_1881_7 HRGMv2_1881_7_103 109280 109945 + 2.A.88.8.6
pfam HRGMv2_1881_7 HRGMv2_1881_7_104 110018 110575 + DcrB
TC HRGMv2_1881_7 HRGMv2_1881_7_105 110644 111834 - 2.A.1.46.7
TC HRGMv2_1881_7 HRGMv2_1881_7_106 111982 113031 + 2.A.86.1.2
TC HRGMv2_1881_7 HRGMv2_1881_7_107 113028 113414 - 2.A.7.22.1
TC HRGMv2_1881_7 HRGMv2_1881_7_108 113411 113749 - 2.A.7.22.2
CAZyme HRGMv2_1881_7 HRGMv2_1881_7_109 113746 115386 - GT83
pfam HRGMv2_1881_7 HRGMv2_1881_7_110 115383 116285 - Polysacc_deac_1
pfam HRGMv2_1881_7 HRGMv2_1881_7_111 116288 118267 - Formyl_trans_N | 3Beta_HSD | Epimerase | Formyl_trans_C | GDP_Man_Dehyd
CAZyme HRGMv2_1881_7 HRGMv2_1881_7_112 118264 119247 - GT2
Gene ID: HRGMv2_1881_7_101
Type: TC
Location: 106642 - 108849 (+)
Gene ID: HRGMv2_1881_7_102
Type: pfam
Location: 108846 - 109091 (-)
Gene ID: HRGMv2_1881_7_103
Type: TC
Location: 109280 - 109945 (+)
Gene ID: HRGMv2_1881_7_104
Type: pfam
Location: 110018 - 110575 (+)
Gene ID: HRGMv2_1881_7_105
Type: TC
Location: 110644 - 111834 (-)
Gene ID: HRGMv2_1881_7_106
Type: TC
Location: 111982 - 113031 (+)
Gene ID: HRGMv2_1881_7_107
Type: TC
Location: 113028 - 113414 (-)
Gene ID: HRGMv2_1881_7_108
Type: TC
Location: 113411 - 113749 (-)
Gene ID: HRGMv2_1881_7_109
Type: CAZyme
Location: 113746 - 115386 (-)
Gene ID: HRGMv2_1881_7_110
Type: pfam
Location: 115383 - 116285 (-)
Gene ID: HRGMv2_1881_7_111
Type: pfam
Location: 116288 - 118267 (-)
Gene ID: HRGMv2_1881_7_112
Type: CAZyme
Location: 118264 - 119247 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_1881_7_102 vegetarian > omnivore 1.02164 0.03699

🧭 Explore Read Mapping of CGC

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