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Cluster: HRGMv2_1881_CGC33

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1881_7 HRGMv2_1881_7_64 64652 65968 + 2.A.8.1.4
CAZyme HRGMv2_1881_7 HRGMv2_1881_7_65 66192 68273 - GH77
CAZyme HRGMv2_1881_7 HRGMv2_1881_7_66 68283 70676 - GT35
TF HRGMv2_1881_7 HRGMv2_1881_7_67 71190 73895 + GerE
TF HRGMv2_1881_7 HRGMv2_1881_7_68 73899 74660 - HTH_DeoR
TC HRGMv2_1881_7 HRGMv2_1881_7_69 74675 75505 - 9.B.104.1.1
STP HRGMv2_1881_7 HRGMv2_1881_7_70 75564 75893 - Rhodanese
pfam HRGMv2_1881_7 HRGMv2_1881_7_71 76082 77587 + DAO | DAO_C
TC HRGMv2_1881_7 HRGMv2_1881_7_72 77639 78979 - 2.A.8.1.8
Gene ID: HRGMv2_1881_7_64
Type: TC
Location: 64652 - 65968 (+)
Gene ID: HRGMv2_1881_7_65
Type: CAZyme
Location: 66192 - 68273 (-)
Gene ID: HRGMv2_1881_7_66
Type: CAZyme
Location: 68283 - 70676 (-)
Gene ID: HRGMv2_1881_7_67
Type: TF
Location: 71190 - 73895 (+)
Gene ID: HRGMv2_1881_7_68
Type: TF
Location: 73899 - 74660 (-)
Gene ID: HRGMv2_1881_7_69
Type: TC
Location: 74675 - 75505 (-)
Gene ID: HRGMv2_1881_7_70
Type: STP
Location: 75564 - 75893 (-)
Gene ID: HRGMv2_1881_7_71
Type: pfam
Location: 76082 - 77587 (+)
Gene ID: HRGMv2_1881_7_72
Type: TC
Location: 77639 - 78979 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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