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Cluster: HRGMv2_1881_CGC32

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1881_6 HRGMv2_1881_6_193 222445 223746 + 2.A.1.14.2
CAZyme HRGMv2_1881_6 HRGMv2_1881_6_194 223762 226128 + GH31_2
TC HRGMv2_1881_6 HRGMv2_1881_6_195 226673 228265 - 3.A.1.121.4
peptidase HRGMv2_1881_6 HRGMv2_1881_6_196 228473 229393 + C82.UPB
TF HRGMv2_1881_6 HRGMv2_1881_6_197 229579 230295 - GntR
TC HRGMv2_1881_6 HRGMv2_1881_6_198 230312 231631 - 4.A.3.2.9
CAZyme HRGMv2_1881_6 HRGMv2_1881_6_199 231655 233031 - GH1
TC HRGMv2_1881_6 HRGMv2_1881_6_200 233232 234272 - 8.A.5.1.3
TC HRGMv2_1881_6 HRGMv2_1881_6_201 234373 235896 - 1.B.17.3.8
TC HRGMv2_1881_6 HRGMv2_1881_6_202 235898 237469 - 2.A.1.3.2
TC HRGMv2_1881_6 HRGMv2_1881_6_203 237466 238575 - 8.A.1.1.2
TC HRGMv2_1881_6 HRGMv2_1881_6_204 238677 239786 - 2.A.45.2.5
Gene ID: HRGMv2_1881_6_193
Type: TC
Location: 222445 - 223746 (+)
Gene ID: HRGMv2_1881_6_194
Type: CAZyme
Location: 223762 - 226128 (+)
Gene ID: HRGMv2_1881_6_195
Type: TC
Location: 226673 - 228265 (-)
Gene ID: HRGMv2_1881_6_196
Type: peptidase
Location: 228473 - 229393 (+)
Gene ID: HRGMv2_1881_6_197
Type: TF
Location: 229579 - 230295 (-)
Gene ID: HRGMv2_1881_6_198
Type: TC
Location: 230312 - 231631 (-)
Gene ID: HRGMv2_1881_6_199
Type: CAZyme
Location: 231655 - 233031 (-)
Gene ID: HRGMv2_1881_6_200
Type: TC
Location: 233232 - 234272 (-)
Gene ID: HRGMv2_1881_6_201
Type: TC
Location: 234373 - 235896 (-)
Gene ID: HRGMv2_1881_6_202
Type: TC
Location: 235898 - 237469 (-)
Gene ID: HRGMv2_1881_6_203
Type: TC
Location: 237466 - 238575 (-)
Gene ID: HRGMv2_1881_6_204
Type: TC
Location: 238677 - 239786 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_1881_6_193 vegetarian > omnivore 1.56623 0.03699
HRGMv2_1881_6_200 vegetarian > omnivore 2.15655 0.03699

🧭 Explore Read Mapping of CGC

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