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Cluster: HRGMv2_1881_CGC31

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1881_5 HRGMv2_1881_5_192 204710 205177 + 3.D.1.9.2
STP HRGMv2_1881_5 HRGMv2_1881_5_193 205185 206483 - Aminotran_1_2
CAZyme HRGMv2_1881_5 HRGMv2_1881_5_194 206578 208614 - GH13_19
CAZyme HRGMv2_1881_5 HRGMv2_1881_5_195 209187 209759 + GH73
TF HRGMv2_1881_5 HRGMv2_1881_5_196 209808 210986 - HTH_AraC | HTH_AraC
TC HRGMv2_1881_5 HRGMv2_1881_5_197 211089 212270 - 3.A.1.2.4
TC HRGMv2_1881_5 HRGMv2_1881_5_198 212248 213789 - 3.A.1.2.4
TC HRGMv2_1881_5 HRGMv2_1881_5_199 213877 214869 - 3.A.1.2.4
Gene ID: HRGMv2_1881_5_192
Type: TC
Location: 204710 - 205177 (+)
Gene ID: HRGMv2_1881_5_193
Type: STP
Location: 205185 - 206483 (-)
Gene ID: HRGMv2_1881_5_194
Type: CAZyme
Location: 206578 - 208614 (-)
Gene ID: HRGMv2_1881_5_195
Type: CAZyme
Location: 209187 - 209759 (+)
Gene ID: HRGMv2_1881_5_196
Type: TF
Location: 209808 - 210986 (-)
Gene ID: HRGMv2_1881_5_197
Type: TC
Location: 211089 - 212270 (-)
Gene ID: HRGMv2_1881_5_198
Type: TC
Location: 212248 - 213789 (-)
Gene ID: HRGMv2_1881_5_199
Type: TC
Location: 213877 - 214869 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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