Cluster: HRGMv2_1881_CGC27

🧬 Cluster Details

Gene Type	Contig ID	Protein ID	Start	Stop	Direction	Protein Family
TC	HRGMv2_1881_5	HRGMv2_1881_5_100	107489	108673	+	2.A.1.2.26
TC	HRGMv2_1881_5	HRGMv2_1881_5_101	108769	109671	-	2.A.7.3.12
pfam	HRGMv2_1881_5	HRGMv2_1881_5_102	109772	111151	-	LamB
TC	HRGMv2_1881_5	HRGMv2_1881_5_103	111296	111601	-	4.A.3.2.1
CAZyme	HRGMv2_1881_5	HRGMv2_1881_5_104	111607	112998	-	GH1
TC	HRGMv2_1881_5	HRGMv2_1881_5_105	113011	114342	-	4.A.3.2.6
TC	HRGMv2_1881_5	HRGMv2_1881_5_106	114354	114668	-	4.A.3.2.6

Gene ID: HRGMv2_1881_5_100
Type: TC
Location: 107489 - 108673 (+)

Gene ID: HRGMv2_1881_5_101
Type: TC
Location: 108769 - 109671 (-)

Gene ID: HRGMv2_1881_5_102
Type: pfam
Location: 109772 - 111151 (-)

Gene ID: HRGMv2_1881_5_103
Type: TC
Location: 111296 - 111601 (-)

Gene ID: HRGMv2_1881_5_104
Type: CAZyme
Location: 111607 - 112998 (-)

Gene ID: HRGMv2_1881_5_105
Type: TC
Location: 113011 - 114342 (-)

Gene ID: HRGMv2_1881_5_106
Type: TC
Location: 114354 - 114668 (-)

Taxonomic Lineage

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Gene Level Read Mapping

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Gene ID	Condition Pair	log2FC	FDR P-value
HRGMv2_1881_5_102	vegetarian > omnivore	1.19496	0.03699
HRGMv2_1881_5_102	vegetarian > vegan	2.01907	0.02017
HRGMv2_1881_5_105	vegetarian > omnivore	1.74224	0.03699
HRGMv2_1881_5_106	vegetarian > omnivore	2.13250	0.03699
HRGMv2_1881_5_106	vegetarian > vegan	2.20721	0.02017