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Cluster: HRGMv2_1881_CGC26

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1881_5 HRGMv2_1881_5_85 94470 95735 - 2.A.1.11.1
TC HRGMv2_1881_5 HRGMv2_1881_5_86 96012 97409 + 2.A.81.1.5
TC HRGMv2_1881_5 HRGMv2_1881_5_87 97410 97682 + 2.A.81.1.5
TC HRGMv2_1881_5 HRGMv2_1881_5_88 97716 98063 + 9.B.51.1.1
pfam HRGMv2_1881_5 HRGMv2_1881_5_89 98053 98403 + DUF202
CAZyme HRGMv2_1881_5 HRGMv2_1881_5_90 98525 99586 + GH5_25
TC HRGMv2_1881_5 HRGMv2_1881_5_91 99489 100673 - 2.A.1.2.9
TC HRGMv2_1881_5 HRGMv2_1881_5_92 100851 101684 - 2.A.7.31.3
Gene ID: HRGMv2_1881_5_85
Type: TC
Location: 94470 - 95735 (-)
Gene ID: HRGMv2_1881_5_86
Type: TC
Location: 96012 - 97409 (+)
Gene ID: HRGMv2_1881_5_87
Type: TC
Location: 97410 - 97682 (+)
Gene ID: HRGMv2_1881_5_88
Type: TC
Location: 97716 - 98063 (+)
Gene ID: HRGMv2_1881_5_89
Type: pfam
Location: 98053 - 98403 (+)
Gene ID: HRGMv2_1881_5_90
Type: CAZyme
Location: 98525 - 99586 (+)
Gene ID: HRGMv2_1881_5_91
Type: TC
Location: 99489 - 100673 (-)
Gene ID: HRGMv2_1881_5_92
Type: TC
Location: 100851 - 101684 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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