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Cluster: HRGMv2_1881_CGC25

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1881_5 HRGMv2_1881_5_17 19144 19524 + 1.A.77.3.11
TC HRGMv2_1881_5 HRGMv2_1881_5_18 19533 20351 + 3.A.2.1.1
TC HRGMv2_1881_5 HRGMv2_1881_5_19 20400 20639 + 3.A.2.1.1
TC HRGMv2_1881_5 HRGMv2_1881_5_20 20698 21168 + 3.A.2.1.1
TC HRGMv2_1881_5 HRGMv2_1881_5_21 21182 21715 + 3.A.2.1.1
TC HRGMv2_1881_5 HRGMv2_1881_5_22 21728 23269 + 3.A.2.1.1
TC HRGMv2_1881_5 HRGMv2_1881_5_23 23320 24183 + 3.A.2.1.1
TC HRGMv2_1881_5 HRGMv2_1881_5_24 24210 25592 + 3.A.2.1.1
TC HRGMv2_1881_5 HRGMv2_1881_5_25 25613 26032 + 3.A.2.1.1
CAZyme HRGMv2_1881_5 HRGMv2_1881_5_26 26367 28472 - PL9
Gene ID: HRGMv2_1881_5_17
Type: TC
Location: 19144 - 19524 (+)
Gene ID: HRGMv2_1881_5_18
Type: TC
Location: 19533 - 20351 (+)
Gene ID: HRGMv2_1881_5_19
Type: TC
Location: 20400 - 20639 (+)
Gene ID: HRGMv2_1881_5_20
Type: TC
Location: 20698 - 21168 (+)
Gene ID: HRGMv2_1881_5_21
Type: TC
Location: 21182 - 21715 (+)
Gene ID: HRGMv2_1881_5_22
Type: TC
Location: 21728 - 23269 (+)
Gene ID: HRGMv2_1881_5_23
Type: TC
Location: 23320 - 24183 (+)
Gene ID: HRGMv2_1881_5_24
Type: TC
Location: 24210 - 25592 (+)
Gene ID: HRGMv2_1881_5_25
Type: TC
Location: 25613 - 26032 (+)
Gene ID: HRGMv2_1881_5_26
Type: CAZyme
Location: 26367 - 28472 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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