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Cluster: HRGMv2_1881_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1881_2 HRGMv2_1881_2_61 66476 67720 - CE4
NULL(UNKNOWN) HRGMv2_1881_2 HRGMv2_1881_2_62 67937 68266 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_1881_2 HRGMv2_1881_2_63 68348 69115 - 3.A.1.105.17
TC HRGMv2_1881_2 HRGMv2_1881_2_64 69115 70041 - 3.A.1.105.17
TC HRGMv2_1881_2 HRGMv2_1881_2_65 70149 70811 + 2.A.53.3.8
STP HRGMv2_1881_2 HRGMv2_1881_2_66 70840 71376 - Pribosyltran
pfam HRGMv2_1881_2 HRGMv2_1881_2_67 71583 73973 + PQQ | PQQ | PQQ | PQQ | PQQ | PQQ_2
CAZyme HRGMv2_1881_2 HRGMv2_1881_2_68 74292 75857 - AA1
TC HRGMv2_1881_2 HRGMv2_1881_2_69 76002 76349 + 8.A.2.1.3
Gene ID: HRGMv2_1881_2_61
Type: CAZyme
Location: 66476 - 67720 (-)
Gene ID: HRGMv2_1881_2_62
Type:
Location: 67937 - 68266 (+)
Gene ID: HRGMv2_1881_2_63
Type: TC
Location: 68348 - 69115 (-)
Gene ID: HRGMv2_1881_2_64
Type: TC
Location: 69115 - 70041 (-)
Gene ID: HRGMv2_1881_2_65
Type: TC
Location: 70149 - 70811 (+)
Gene ID: HRGMv2_1881_2_66
Type: STP
Location: 70840 - 71376 (-)
Gene ID: HRGMv2_1881_2_67
Type: pfam
Location: 71583 - 73973 (+)
Gene ID: HRGMv2_1881_2_68
Type: CAZyme
Location: 74292 - 75857 (-)
Gene ID: HRGMv2_1881_2_69
Type: TC
Location: 76002 - 76349 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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