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Cluster: HRGMv2_1878_CGC46

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1878_22 HRGMv2_1878_22_25 24808 25872 - GT28
TC HRGMv2_1878_22 HRGMv2_1878_22_26 25869 27122 - 2.A.103.1.1
pfam HRGMv2_1878_22 HRGMv2_1878_22_27 27122 28438 - Mur_ligase_C | Mur_ligase_M | MurD-like_N
TC HRGMv2_1878_22 HRGMv2_1878_22_28 28441 29523 - 9.B.146.1.6
Gene ID: HRGMv2_1878_22_25
Type: CAZyme
Location: 24808 - 25872 (-)
Gene ID: HRGMv2_1878_22_26
Type: TC
Location: 25869 - 27122 (-)
Gene ID: HRGMv2_1878_22_27
Type: pfam
Location: 27122 - 28438 (-)
Gene ID: HRGMv2_1878_22_28
Type: TC
Location: 28441 - 29523 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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