dbCAN Logo

Cluster: HRGMv2_1878_CGC32

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1878_13 HRGMv2_1878_13_69 67829 69058 - 2.A.42.2.5
TC HRGMv2_1878_13 HRGMv2_1878_13_70 69177 69638 - 2.A.117.1.3
TF HRGMv2_1878_13 HRGMv2_1878_13_71 69745 70620 + HTH_1
pfam HRGMv2_1878_13 HRGMv2_1878_13_72 70702 71229 + Cupin_2
TC HRGMv2_1878_13 HRGMv2_1878_13_73 71244 72020 - 3.A.1.3.29
peptidase HRGMv2_1878_13 HRGMv2_1878_13_74 72035 73213 - M20.UPD
pfam HRGMv2_1878_13 HRGMv2_1878_13_75 73450 74628 + Thiolase_N | ketoacyl-synt | Thiolase_C
TC HRGMv2_1878_13 HRGMv2_1878_13_76 74957 75640 + 1.B.35.1.5
CAZyme HRGMv2_1878_13 HRGMv2_1878_13_77 75785 76960 - PL22 | PL22
pfam HRGMv2_1878_13 HRGMv2_1878_13_78 77414 78250 + KduI
pfam HRGMv2_1878_13 HRGMv2_1878_13_79 78313 79074 + adh_short | KR | adh_short_C2
TC HRGMv2_1878_13 HRGMv2_1878_13_80 79452 80804 + 2.A.1.1.2
CAZyme HRGMv2_1878_13 HRGMv2_1878_13_81 80898 82025 - PL22 | PL22_1
TC HRGMv2_1878_13 HRGMv2_1878_13_82 82092 83381 - 3.A.1.1.11
TC HRGMv2_1878_13 HRGMv2_1878_13_83 83395 84522 - 3.A.1.1.11
TC HRGMv2_1878_13 HRGMv2_1878_13_84 84535 85437 - 3.A.1.1.11
TC HRGMv2_1878_13 HRGMv2_1878_13_85 85430 86320 - 3.A.1.1.11
Gene ID: HRGMv2_1878_13_69
Type: TC
Location: 67829 - 69058 (-)
Gene ID: HRGMv2_1878_13_70
Type: TC
Location: 69177 - 69638 (-)
Gene ID: HRGMv2_1878_13_71
Type: TF
Location: 69745 - 70620 (+)
Gene ID: HRGMv2_1878_13_72
Type: pfam
Location: 70702 - 71229 (+)
Gene ID: HRGMv2_1878_13_73
Type: TC
Location: 71244 - 72020 (-)
Gene ID: HRGMv2_1878_13_74
Type: peptidase
Location: 72035 - 73213 (-)
Gene ID: HRGMv2_1878_13_75
Type: pfam
Location: 73450 - 74628 (+)
Gene ID: HRGMv2_1878_13_76
Type: TC
Location: 74957 - 75640 (+)
Gene ID: HRGMv2_1878_13_77
Type: CAZyme
Location: 75785 - 76960 (-)
Gene ID: HRGMv2_1878_13_78
Type: pfam
Location: 77414 - 78250 (+)
Gene ID: HRGMv2_1878_13_79
Type: pfam
Location: 78313 - 79074 (+)
Gene ID: HRGMv2_1878_13_80
Type: TC
Location: 79452 - 80804 (+)
Gene ID: HRGMv2_1878_13_81
Type: CAZyme
Location: 80898 - 82025 (-)
Gene ID: HRGMv2_1878_13_82
Type: TC
Location: 82092 - 83381 (-)
Gene ID: HRGMv2_1878_13_83
Type: TC
Location: 83395 - 84522 (-)
Gene ID: HRGMv2_1878_13_84
Type: TC
Location: 84535 - 85437 (-)
Gene ID: HRGMv2_1878_13_85
Type: TC
Location: 85430 - 86320 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_1878_13_69 vegetarian > omnivore 2.46928 0.02798
HRGMv2_1878_13_77 vegetarian > omnivore 2.83968 0.02798
HRGMv2_1878_13_77 vegetarian > vegan 1.30001 0.03350
HRGMv2_1878_13_82 vegetarian > omnivore 1.38972 0.02798
HRGMv2_1878_13_84 vegetarian > omnivore 1.03080 0.02798

🧭 Explore Read Mapping of CGC

← Back to Cluster List