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Cluster: HRGMv2_1878_CGC27

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1878_10 HRGMv2_1878_10_91 97707 99800 + PL9
TC HRGMv2_1878_10 HRGMv2_1878_10_92 100138 100557 - 3.A.2.1.1
TC HRGMv2_1878_10 HRGMv2_1878_10_93 100578 101960 - 3.A.2.1.1
TC HRGMv2_1878_10 HRGMv2_1878_10_94 101987 102850 - 3.A.2.1.1
TC HRGMv2_1878_10 HRGMv2_1878_10_95 102901 104442 - 3.A.2.1.1
TC HRGMv2_1878_10 HRGMv2_1878_10_96 104455 104988 - 3.A.2.1.1
TC HRGMv2_1878_10 HRGMv2_1878_10_97 105003 105473 - 3.A.2.1.1
TC HRGMv2_1878_10 HRGMv2_1878_10_98 105522 105761 - 3.A.2.1.1
TC HRGMv2_1878_10 HRGMv2_1878_10_99 105811 106626 - 3.A.2.1.1
TC HRGMv2_1878_10 HRGMv2_1878_10_100 106635 107015 - 1.A.77.3.8
Gene ID: HRGMv2_1878_10_91
Type: CAZyme
Location: 97707 - 99800 (+)
Gene ID: HRGMv2_1878_10_92
Type: TC
Location: 100138 - 100557 (-)
Gene ID: HRGMv2_1878_10_93
Type: TC
Location: 100578 - 101960 (-)
Gene ID: HRGMv2_1878_10_94
Type: TC
Location: 101987 - 102850 (-)
Gene ID: HRGMv2_1878_10_95
Type: TC
Location: 102901 - 104442 (-)
Gene ID: HRGMv2_1878_10_96
Type: TC
Location: 104455 - 104988 (-)
Gene ID: HRGMv2_1878_10_97
Type: TC
Location: 105003 - 105473 (-)
Gene ID: HRGMv2_1878_10_98
Type: TC
Location: 105522 - 105761 (-)
Gene ID: HRGMv2_1878_10_99
Type: TC
Location: 105811 - 106626 (-)
Gene ID: HRGMv2_1878_10_100
Type: TC
Location: 106635 - 107015 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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