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Cluster: HRGMv2_1878_CGC26

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1878_10 HRGMv2_1878_10_79 83786 85120 - 2.A.40.7.6
pfam HRGMv2_1878_10 HRGMv2_1878_10_80 85289 85954 + Hydrolase | HAD_2
CAZyme HRGMv2_1878_10 HRGMv2_1878_10_81 85995 87164 - CE1
TC HRGMv2_1878_10 HRGMv2_1878_10_82 87190 88728 - 1.B.3.1.3
pfam HRGMv2_1878_10 HRGMv2_1878_10_83 89056 89781 - PhoU | PhoU
TC HRGMv2_1878_10 HRGMv2_1878_10_84 89796 90569 - 3.A.1.7.1
TC HRGMv2_1878_10 HRGMv2_1878_10_85 90617 91507 - 3.A.1.7.1
TC HRGMv2_1878_10 HRGMv2_1878_10_86 91507 92466 - 3.A.1.7.1
TC HRGMv2_1878_10 HRGMv2_1878_10_87 92595 93635 - 3.A.1.7.1
Gene ID: HRGMv2_1878_10_79
Type: TC
Location: 83786 - 85120 (-)
Gene ID: HRGMv2_1878_10_80
Type: pfam
Location: 85289 - 85954 (+)
Gene ID: HRGMv2_1878_10_81
Type: CAZyme
Location: 85995 - 87164 (-)
Gene ID: HRGMv2_1878_10_82
Type: TC
Location: 87190 - 88728 (-)
Gene ID: HRGMv2_1878_10_83
Type: pfam
Location: 89056 - 89781 (-)
Gene ID: HRGMv2_1878_10_84
Type: TC
Location: 89796 - 90569 (-)
Gene ID: HRGMv2_1878_10_85
Type: TC
Location: 90617 - 91507 (-)
Gene ID: HRGMv2_1878_10_86
Type: TC
Location: 91507 - 92466 (-)
Gene ID: HRGMv2_1878_10_87
Type: TC
Location: 92595 - 93635 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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