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Cluster: HRGMv2_1878_CGC24

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1878_10 HRGMv2_1878_10_4 4545 5783 - 2.A.27.1.1
TC HRGMv2_1878_10 HRGMv2_1878_10_5 5972 7363 + 2.A.40.4.2
pfam HRGMv2_1878_10 HRGMv2_1878_10_6 7482 9194 + AsmA
CAZyme HRGMv2_1878_10 HRGMv2_1878_10_7 9287 11605 - GH31_3
TC HRGMv2_1878_10 HRGMv2_1878_10_8 11618 13012 - 2.A.2.3.4
Gene ID: HRGMv2_1878_10_4
Type: TC
Location: 4545 - 5783 (-)
Gene ID: HRGMv2_1878_10_5
Type: TC
Location: 5972 - 7363 (+)
Gene ID: HRGMv2_1878_10_6
Type: pfam
Location: 7482 - 9194 (+)
Gene ID: HRGMv2_1878_10_7
Type: CAZyme
Location: 9287 - 11605 (-)
Gene ID: HRGMv2_1878_10_8
Type: TC
Location: 11618 - 13012 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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