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Cluster: HRGMv2_1878_CGC21

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1878_8 HRGMv2_1878_8_85 104704 106902 - GT2 | GT2
CAZyme HRGMv2_1878_8 HRGMv2_1878_8_86 106947 108185 - GT2
pfam HRGMv2_1878_8 HRGMv2_1878_8_87 108404 109480 - Glyco_transf_61
pfam HRGMv2_1878_8 HRGMv2_1878_8_88 109699 110853 - PS_pyruv_trans
CAZyme HRGMv2_1878_8 HRGMv2_1878_8_89 111014 112255 - GT4
CAZyme HRGMv2_1878_8 HRGMv2_1878_8_90 112261 114129 - GT2
NULL(UNKNOWN) HRGMv2_1878_8 HRGMv2_1878_8_91 114311 115513 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_1878_8 HRGMv2_1878_8_92 115528 116178 - 3.A.1.101.1
TC HRGMv2_1878_8 HRGMv2_1878_8_93 116190 116990 - 3.A.1.101.1
TC HRGMv2_1878_8 HRGMv2_1878_8_94 117045 118703 - 1.B.18.1.2
Gene ID: HRGMv2_1878_8_85
Type: CAZyme
Location: 104704 - 106902 (-)
Gene ID: HRGMv2_1878_8_86
Type: CAZyme
Location: 106947 - 108185 (-)
Gene ID: HRGMv2_1878_8_87
Type: pfam
Location: 108404 - 109480 (-)
Gene ID: HRGMv2_1878_8_88
Type: pfam
Location: 109699 - 110853 (-)
Gene ID: HRGMv2_1878_8_89
Type: CAZyme
Location: 111014 - 112255 (-)
Gene ID: HRGMv2_1878_8_90
Type: CAZyme
Location: 112261 - 114129 (-)
Gene ID: HRGMv2_1878_8_91
Type:
Location: 114311 - 115513 (-)
Gene ID: HRGMv2_1878_8_92
Type: TC
Location: 115528 - 116178 (-)
Gene ID: HRGMv2_1878_8_93
Type: TC
Location: 116190 - 116990 (-)
Gene ID: HRGMv2_1878_8_94
Type: TC
Location: 117045 - 118703 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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