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Cluster: HRGMv2_1878_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1878_1 HRGMv2_1878_1_177 196448 198310 + 4.A.1.2.2
CAZyme HRGMv2_1878_1 HRGMv2_1878_1_178 198323 199717 + GH1
TC HRGMv2_1878_1 HRGMv2_1878_1_179 199862 201280 + 1.B.17.3.10
sulfatase HRGMv2_1878_1 HRGMv2_1878_1_180 201333 202106 + S1_4
TC HRGMv2_1878_1 HRGMv2_1878_1_181 202108 202668 - 9.B.27.2.7
NULL(UNKNOWN) HRGMv2_1878_1 HRGMv2_1878_1_182 202693 202959 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_1878_1 HRGMv2_1878_1_183 203110 203697 + 9.B.29.3.1
Gene ID: HRGMv2_1878_1_177
Type: TC
Location: 196448 - 198310 (+)
Gene ID: HRGMv2_1878_1_178
Type: CAZyme
Location: 198323 - 199717 (+)
Gene ID: HRGMv2_1878_1_179
Type: TC
Location: 199862 - 201280 (+)
Gene ID: HRGMv2_1878_1_180
Type: sulfatase
Location: 201333 - 202106 (+)
Gene ID: HRGMv2_1878_1_181
Type: TC
Location: 202108 - 202668 (-)
Gene ID: HRGMv2_1878_1_182
Type:
Location: 202693 - 202959 (-)
Gene ID: HRGMv2_1878_1_183
Type: TC
Location: 203110 - 203697 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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