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Cluster: HRGMv2_1878_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1878_4 HRGMv2_1878_4_189 198148 199572 - GT20
pfam HRGMv2_1878_4 HRGMv2_1878_4_190 199547 200353 - Trehalose_PPase | Hydrolase_3
TC HRGMv2_1878_4 HRGMv2_1878_4_191 200528 201508 - 3.A.1.2.2
TC HRGMv2_1878_4 HRGMv2_1878_4_192 201523 203037 - 3.A.1.2.2
TC HRGMv2_1878_4 HRGMv2_1878_4_193 203107 204096 - 3.A.1.2.2
peptidase HRGMv2_1878_4 HRGMv2_1878_4_194 204411 204968 - C56.UNW
pfam HRGMv2_1878_4 HRGMv2_1878_4_195 205514 206017 + Ferritin
TC HRGMv2_1878_4 HRGMv2_1878_4_196 206188 207531 + 2.A.13.1.2
pfam HRGMv2_1878_4 HRGMv2_1878_4_197 207612 207863 - DUF2766
TC HRGMv2_1878_4 HRGMv2_1878_4_198 208255 209676 + 2.A.1.3.51
Gene ID: HRGMv2_1878_4_189
Type: CAZyme
Location: 198148 - 199572 (-)
Gene ID: HRGMv2_1878_4_190
Type: pfam
Location: 199547 - 200353 (-)
Gene ID: HRGMv2_1878_4_191
Type: TC
Location: 200528 - 201508 (-)
Gene ID: HRGMv2_1878_4_192
Type: TC
Location: 201523 - 203037 (-)
Gene ID: HRGMv2_1878_4_193
Type: TC
Location: 203107 - 204096 (-)
Gene ID: HRGMv2_1878_4_194
Type: peptidase
Location: 204411 - 204968 (-)
Gene ID: HRGMv2_1878_4_195
Type: pfam
Location: 205514 - 206017 (+)
Gene ID: HRGMv2_1878_4_196
Type: TC
Location: 206188 - 207531 (+)
Gene ID: HRGMv2_1878_4_197
Type: pfam
Location: 207612 - 207863 (-)
Gene ID: HRGMv2_1878_4_198
Type: TC
Location: 208255 - 209676 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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