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Cluster: HRGMv2_1843_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1843_9 HRGMv2_1843_9_120 142780 143529 + 3.A.1.2.24
TC HRGMv2_1843_9 HRGMv2_1843_9_121 143534 144499 + 3.A.1.2.18
CAZyme HRGMv2_1843_9 HRGMv2_1843_9_122 144539 145918 + GH4
TC HRGMv2_1843_9 HRGMv2_1843_9_123 146008 147699 + 8.A.59.2.1
TF HRGMv2_1843_9 HRGMv2_1843_9_124 147677 148414 + LytTR
TC HRGMv2_1843_9 HRGMv2_1843_9_125 148561 149784 + 2.A.1.11.3
pfam HRGMv2_1843_9 HRGMv2_1843_9_126 149852 150493 - LacAB_rpiB | DUF3666
pfam HRGMv2_1843_9 HRGMv2_1843_9_127 150921 153062 - OKR_DC_1 | OKR_DC_1_N | OKR_DC_1_C
TC HRGMv2_1843_9 HRGMv2_1843_9_128 153078 154409 - 2.A.3.2.1
Gene ID: HRGMv2_1843_9_120
Type: TC
Location: 142780 - 143529 (+)
Gene ID: HRGMv2_1843_9_121
Type: TC
Location: 143534 - 144499 (+)
Gene ID: HRGMv2_1843_9_122
Type: CAZyme
Location: 144539 - 145918 (+)
Gene ID: HRGMv2_1843_9_123
Type: TC
Location: 146008 - 147699 (+)
Gene ID: HRGMv2_1843_9_124
Type: TF
Location: 147677 - 148414 (+)
Gene ID: HRGMv2_1843_9_125
Type: TC
Location: 148561 - 149784 (+)
Gene ID: HRGMv2_1843_9_126
Type: pfam
Location: 149852 - 150493 (-)
Gene ID: HRGMv2_1843_9_127
Type: pfam
Location: 150921 - 153062 (-)
Gene ID: HRGMv2_1843_9_128
Type: TC
Location: 153078 - 154409 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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