dbCAN Logo

Cluster: HRGMv2_1843_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1843_9 HRGMv2_1843_9_109 129875 131131 - 4.A.7.1.2
TC HRGMv2_1843_9 HRGMv2_1843_9_110 131142 131429 - 4.A.7.1.2
TC HRGMv2_1843_9 HRGMv2_1843_9_111 131456 131899 - 4.A.7.1.2
TF HRGMv2_1843_9 HRGMv2_1843_9_112 132132 133166 + LacI
TC HRGMv2_1843_9 HRGMv2_1843_9_113 133652 134956 + 2.A.1.14.14
CAZyme HRGMv2_1843_9 HRGMv2_1843_9_114 135002 137368 - GH31_2
TC HRGMv2_1843_9 HRGMv2_1843_9_115 137384 138685 - 2.A.1.14.2
Gene ID: HRGMv2_1843_9_109
Type: TC
Location: 129875 - 131131 (-)
Gene ID: HRGMv2_1843_9_110
Type: TC
Location: 131142 - 131429 (-)
Gene ID: HRGMv2_1843_9_111
Type: TC
Location: 131456 - 131899 (-)
Gene ID: HRGMv2_1843_9_112
Type: TF
Location: 132132 - 133166 (+)
Gene ID: HRGMv2_1843_9_113
Type: TC
Location: 133652 - 134956 (+)
Gene ID: HRGMv2_1843_9_114
Type: CAZyme
Location: 135002 - 137368 (-)
Gene ID: HRGMv2_1843_9_115
Type: TC
Location: 137384 - 138685 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List