dbCAN Logo

Cluster: HRGMv2_1843_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1843_3 HRGMv2_1843_3_107 129893 131293 - GH1
TC HRGMv2_1843_3 HRGMv2_1843_3_108 131892 133193 - 2.A.56.1.5
TC HRGMv2_1843_3 HRGMv2_1843_3_109 133193 133696 - 2.A.56.1.5
TC HRGMv2_1843_3 HRGMv2_1843_3_110 133763 134749 - 2.A.56.1.5
TF HRGMv2_1843_3 HRGMv2_1843_3_111 135121 136041 + HTH_1
pfam HRGMv2_1843_3 HRGMv2_1843_3_112 136167 137282 + A_deaminase
TC HRGMv2_1843_3 HRGMv2_1843_3_113 137286 138542 + 2.A.61.1.3
TF HRGMv2_1843_3 HRGMv2_1843_3_114 138726 139457 + 0038753
pfam HRGMv2_1843_3 HRGMv2_1843_3_115 139466 140212 + PNP_UDP_1
TC HRGMv2_1843_3 HRGMv2_1843_3_116 140212 140940 + 4.B.1.1.1
pfam HRGMv2_1843_3 HRGMv2_1843_3_117 140977 141417 - Acetyltransf_1 | Acetyltransf_3 | Acetyltransf_7
TC HRGMv2_1843_3 HRGMv2_1843_3_118 141519 142391 - 2.A.1.10.1
TC HRGMv2_1843_3 HRGMv2_1843_3_119 142753 144015 - 2.A.1.10.1
Gene ID: HRGMv2_1843_3_107
Type: CAZyme
Location: 129893 - 131293 (-)
Gene ID: HRGMv2_1843_3_108
Type: TC
Location: 131892 - 133193 (-)
Gene ID: HRGMv2_1843_3_109
Type: TC
Location: 133193 - 133696 (-)
Gene ID: HRGMv2_1843_3_110
Type: TC
Location: 133763 - 134749 (-)
Gene ID: HRGMv2_1843_3_111
Type: TF
Location: 135121 - 136041 (+)
Gene ID: HRGMv2_1843_3_112
Type: pfam
Location: 136167 - 137282 (+)
Gene ID: HRGMv2_1843_3_113
Type: TC
Location: 137286 - 138542 (+)
Gene ID: HRGMv2_1843_3_114
Type: TF
Location: 138726 - 139457 (+)
Gene ID: HRGMv2_1843_3_115
Type: pfam
Location: 139466 - 140212 (+)
Gene ID: HRGMv2_1843_3_116
Type: TC
Location: 140212 - 140940 (+)
Gene ID: HRGMv2_1843_3_117
Type: pfam
Location: 140977 - 141417 (-)
Gene ID: HRGMv2_1843_3_118
Type: TC
Location: 141519 - 142391 (-)
Gene ID: HRGMv2_1843_3_119
Type: TC
Location: 142753 - 144015 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List