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Cluster: HRGMv2_1843_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1843_2 HRGMv2_1843_2_245 268849 270339 - GH154
sulfatase HRGMv2_1843_2 HRGMv2_1843_2_246 270406 272022 - S1_44
sulfatase HRGMv2_1843_2 HRGMv2_1843_2_247 272037 273269 - S1_48
CAZyme HRGMv2_1843_2 HRGMv2_1843_2_248 273462 274511 - GH105
CAZyme HRGMv2_1843_2 HRGMv2_1843_2_249 274649 275806 - CE9
TC HRGMv2_1843_2 HRGMv2_1843_2_250 275808 276248 - 4.A.6.1.16
TC HRGMv2_1843_2 HRGMv2_1843_2_251 276317 277207 - 4.A.6.1.4
TC HRGMv2_1843_2 HRGMv2_1843_2_252 277197 277967 - 4.A.6.1.4
TC HRGMv2_1843_2 HRGMv2_1843_2_253 278021 278518 - 4.A.6.1.4
Gene ID: HRGMv2_1843_2_245
Type: CAZyme
Location: 268849 - 270339 (-)
Gene ID: HRGMv2_1843_2_246
Type: sulfatase
Location: 270406 - 272022 (-)
Gene ID: HRGMv2_1843_2_247
Type: sulfatase
Location: 272037 - 273269 (-)
Gene ID: HRGMv2_1843_2_248
Type: CAZyme
Location: 273462 - 274511 (-)
Gene ID: HRGMv2_1843_2_249
Type: CAZyme
Location: 274649 - 275806 (-)
Gene ID: HRGMv2_1843_2_250
Type: TC
Location: 275808 - 276248 (-)
Gene ID: HRGMv2_1843_2_251
Type: TC
Location: 276317 - 277207 (-)
Gene ID: HRGMv2_1843_2_252
Type: TC
Location: 277197 - 277967 (-)
Gene ID: HRGMv2_1843_2_253
Type: TC
Location: 278021 - 278518 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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