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Cluster: HRGMv2_1843_CGC27

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1843_25 HRGMv2_1843_25_73 73052 73708 + GH23
TC HRGMv2_1843_25 HRGMv2_1843_25_74 74110 75393 + 2.A.42.2.1
TC HRGMv2_1843_25 HRGMv2_1843_25_75 75505 76125 - 3.A.1.5.3
TC HRGMv2_1843_25 HRGMv2_1843_25_76 76119 76913 - 3.A.1.5.3
TC HRGMv2_1843_25 HRGMv2_1843_25_77 76907 77719 - 3.A.1.5.2
TC HRGMv2_1843_25 HRGMv2_1843_25_78 77709 78683 - 3.A.1.5.11
TC HRGMv2_1843_25 HRGMv2_1843_25_79 78683 80269 - 3.A.1.5.3
TC HRGMv2_1843_25 HRGMv2_1843_25_80 80610 80975 + 9.B.124.1.2
Gene ID: HRGMv2_1843_25_73
Type: CAZyme
Location: 73052 - 73708 (+)
Gene ID: HRGMv2_1843_25_74
Type: TC
Location: 74110 - 75393 (+)
Gene ID: HRGMv2_1843_25_75
Type: TC
Location: 75505 - 76125 (-)
Gene ID: HRGMv2_1843_25_76
Type: TC
Location: 76119 - 76913 (-)
Gene ID: HRGMv2_1843_25_77
Type: TC
Location: 76907 - 77719 (-)
Gene ID: HRGMv2_1843_25_78
Type: TC
Location: 77709 - 78683 (-)
Gene ID: HRGMv2_1843_25_79
Type: TC
Location: 78683 - 80269 (-)
Gene ID: HRGMv2_1843_25_80
Type: TC
Location: 80610 - 80975 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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