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Cluster: HRGMv2_1843_CGC25

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1843_24 HRGMv2_1843_24_28 29301 29558 - 2.A.64.1.1
NULL(UNKNOWN) HRGMv2_1843_24 HRGMv2_1843_24_29 29715 30044 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_1843_24 HRGMv2_1843_24_30 30200 31117 - 8.A.5.1.7
TC HRGMv2_1843_24 HRGMv2_1843_24_31 31419 32450 + 2.A.52.1.1
CAZyme HRGMv2_1843_24 HRGMv2_1843_24_32 32582 33193 + GH23
NULL(UNKNOWN) HRGMv2_1843_24 HRGMv2_1843_24_33 33294 33539 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_1843_24 HRGMv2_1843_24_34 33557 35095 - 4.C.1.1.6
peptidase HRGMv2_1843_24 HRGMv2_1843_24_35 35738 36523 - S49.UNC
TC HRGMv2_1843_24 HRGMv2_1843_24_36 36625 38184 - 4.C.1.1.6
pfam HRGMv2_1843_24 HRGMv2_1843_24_37 38253 39473 - CoA_transf_3
pfam HRGMv2_1843_24 HRGMv2_1843_24_38 39575 40717 - Acyl-CoA_dh_1 | Acyl-CoA_dh_M | Acyl-CoA_dh_N | Acyl-CoA_dh_2
TC HRGMv2_1843_24 HRGMv2_1843_24_39 40749 42272 - 2.A.15.2.1
Gene ID: HRGMv2_1843_24_28
Type: TC
Location: 29301 - 29558 (-)
Gene ID: HRGMv2_1843_24_29
Type:
Location: 29715 - 30044 (-)
Gene ID: HRGMv2_1843_24_30
Type: TC
Location: 30200 - 31117 (-)
Gene ID: HRGMv2_1843_24_31
Type: TC
Location: 31419 - 32450 (+)
Gene ID: HRGMv2_1843_24_32
Type: CAZyme
Location: 32582 - 33193 (+)
Gene ID: HRGMv2_1843_24_33
Type:
Location: 33294 - 33539 (-)
Gene ID: HRGMv2_1843_24_34
Type: TC
Location: 33557 - 35095 (-)
Gene ID: HRGMv2_1843_24_35
Type: peptidase
Location: 35738 - 36523 (-)
Gene ID: HRGMv2_1843_24_36
Type: TC
Location: 36625 - 38184 (-)
Gene ID: HRGMv2_1843_24_37
Type: pfam
Location: 38253 - 39473 (-)
Gene ID: HRGMv2_1843_24_38
Type: pfam
Location: 39575 - 40717 (-)
Gene ID: HRGMv2_1843_24_39
Type: TC
Location: 40749 - 42272 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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