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Cluster: HRGMv2_1843_CGC16

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1843_18 HRGMv2_1843_18_13 12952 14175 + 2.A.39.1.1
TF HRGMv2_1843_18 HRGMv2_1843_18_14 14251 15159 + HTH_1
TC HRGMv2_1843_18 HRGMv2_1843_18_15 15156 16322 - 2.A.1.7.11
TF HRGMv2_1843_18 HRGMv2_1843_18_16 16389 17153 + HTH_6
CAZyme HRGMv2_1843_18 HRGMv2_1843_18_17 17137 18516 - GH4
TC HRGMv2_1843_18 HRGMv2_1843_18_18 18529 20094 - 4.A.1.1.10
TC HRGMv2_1843_18 HRGMv2_1843_18_19 20527 22002 - 2.A.1.3.43
Gene ID: HRGMv2_1843_18_13
Type: TC
Location: 12952 - 14175 (+)
Gene ID: HRGMv2_1843_18_14
Type: TF
Location: 14251 - 15159 (+)
Gene ID: HRGMv2_1843_18_15
Type: TC
Location: 15156 - 16322 (-)
Gene ID: HRGMv2_1843_18_16
Type: TF
Location: 16389 - 17153 (+)
Gene ID: HRGMv2_1843_18_17
Type: CAZyme
Location: 17137 - 18516 (-)
Gene ID: HRGMv2_1843_18_18
Type: TC
Location: 18529 - 20094 (-)
Gene ID: HRGMv2_1843_18_19
Type: TC
Location: 20527 - 22002 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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