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Cluster: HRGMv2_1843_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1843_14 HRGMv2_1843_14_232 255317 256936 + 3.A.1.19.4
TC HRGMv2_1843_14 HRGMv2_1843_14_233 256923 257546 + 3.A.1.19.4
TF HRGMv2_1843_14 HRGMv2_1843_14_234 257527 258441 - HTH_1
TC HRGMv2_1843_14 HRGMv2_1843_14_235 258581 259798 + 2.A.1.2.62
pfam HRGMv2_1843_14 HRGMv2_1843_14_236 260092 261243 + CMAS | Methyltransf_11 | Methyltransf_12 | Methyltransf_23 | Methyltransf_25
TC HRGMv2_1843_14 HRGMv2_1843_14_237 261302 264460 - 2.A.6.1.3
TC HRGMv2_1843_14 HRGMv2_1843_14_238 264453 265757 - 2.A.6.1.4
pfam HRGMv2_1843_14 HRGMv2_1843_14_239 265864 266211 - CusF_Ec
TC HRGMv2_1843_14 HRGMv2_1843_14_240 266243 267703 - 1.B.17.3.4
TF HRGMv2_1843_14 HRGMv2_1843_14_241 267818 268501 + Trans_reg_C
TC HRGMv2_1843_14 HRGMv2_1843_14_242 268491 269942 + 2.A.21.9.1
NULL(UNKNOWN) HRGMv2_1843_14 HRGMv2_1843_14_243 270397 270699 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_1843_14 HRGMv2_1843_14_244 270777 272291 - 2.A.21.2.1
sulfatase HRGMv2_1843_14 HRGMv2_1843_14_245 272829 276776 + S1_6
TC HRGMv2_1843_14 HRGMv2_1843_14_246 277145 278056 - 9.B.1.1.6
CAZyme HRGMv2_1843_14 HRGMv2_1843_14_247 278258 280285 - GH13_19
NULL(UNKNOWN) HRGMv2_1843_14 HRGMv2_1843_14_248 280578 280742 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_1843_14 HRGMv2_1843_14_249 280798 282840 - 9.B.174.1.2
Gene ID: HRGMv2_1843_14_232
Type: TC
Location: 255317 - 256936 (+)
Gene ID: HRGMv2_1843_14_233
Type: TC
Location: 256923 - 257546 (+)
Gene ID: HRGMv2_1843_14_234
Type: TF
Location: 257527 - 258441 (-)
Gene ID: HRGMv2_1843_14_235
Type: TC
Location: 258581 - 259798 (+)
Gene ID: HRGMv2_1843_14_236
Type: pfam
Location: 260092 - 261243 (+)
Gene ID: HRGMv2_1843_14_237
Type: TC
Location: 261302 - 264460 (-)
Gene ID: HRGMv2_1843_14_238
Type: TC
Location: 264453 - 265757 (-)
Gene ID: HRGMv2_1843_14_239
Type: pfam
Location: 265864 - 266211 (-)
Gene ID: HRGMv2_1843_14_240
Type: TC
Location: 266243 - 267703 (-)
Gene ID: HRGMv2_1843_14_241
Type: TF
Location: 267818 - 268501 (+)
Gene ID: HRGMv2_1843_14_242
Type: TC
Location: 268491 - 269942 (+)
Gene ID: HRGMv2_1843_14_243
Type:
Location: 270397 - 270699 (+)
Gene ID: HRGMv2_1843_14_244
Type: TC
Location: 270777 - 272291 (-)
Gene ID: HRGMv2_1843_14_245
Type: sulfatase
Location: 272829 - 276776 (+)
Gene ID: HRGMv2_1843_14_246
Type: TC
Location: 277145 - 278056 (-)
Gene ID: HRGMv2_1843_14_247
Type: CAZyme
Location: 278258 - 280285 (-)
Gene ID: HRGMv2_1843_14_248
Type:
Location: 280578 - 280742 (-)
Gene ID: HRGMv2_1843_14_249
Type: TC
Location: 280798 - 282840 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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