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Cluster: HRGMv2_1843_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1843_14 HRGMv2_1843_14_5 2513 3547 + GH3
peptidase HRGMv2_1843_14 HRGMv2_1843_14_6 3666 4208 + S09.UNW
TC HRGMv2_1843_14 HRGMv2_1843_14_7 4254 5312 - 3.A.1.11.1
TC HRGMv2_1843_14 HRGMv2_1843_14_8 5501 6874 - 2.A.3.2.2
TC HRGMv2_1843_14 HRGMv2_1843_14_9 7263 8039 - 3.A.1.11.1
TC HRGMv2_1843_14 HRGMv2_1843_14_10 8208 9074 - 3.A.1.11.1
TC HRGMv2_1843_14 HRGMv2_1843_14_11 9058 10191 - 3.A.1.11.1
peptidase HRGMv2_1843_14 HRGMv2_1843_14_12 10882 12117 + M20.003
pfam HRGMv2_1843_14 HRGMv2_1843_14_13 12196 12786 - Flavodoxin_2
TC HRGMv2_1843_14 HRGMv2_1843_14_14 13434 14723 + 2.A.42.2.4
Gene ID: HRGMv2_1843_14_5
Type: CAZyme
Location: 2513 - 3547 (+)
Gene ID: HRGMv2_1843_14_6
Type: peptidase
Location: 3666 - 4208 (+)
Gene ID: HRGMv2_1843_14_7
Type: TC
Location: 4254 - 5312 (-)
Gene ID: HRGMv2_1843_14_8
Type: TC
Location: 5501 - 6874 (-)
Gene ID: HRGMv2_1843_14_9
Type: TC
Location: 7263 - 8039 (-)
Gene ID: HRGMv2_1843_14_10
Type: TC
Location: 8208 - 9074 (-)
Gene ID: HRGMv2_1843_14_11
Type: TC
Location: 9058 - 10191 (-)
Gene ID: HRGMv2_1843_14_12
Type: peptidase
Location: 10882 - 12117 (+)
Gene ID: HRGMv2_1843_14_13
Type: pfam
Location: 12196 - 12786 (-)
Gene ID: HRGMv2_1843_14_14
Type: TC
Location: 13434 - 14723 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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