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Cluster: HRGMv2_1843_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1843_2 HRGMv2_1843_2_129 144544 145038 - 3.D.7.2.3
TC HRGMv2_1843_2 HRGMv2_1843_2_130 145038 146741 - 3.D.7.2.1
NULL(UNKNOWN) HRGMv2_1843_2 HRGMv2_1843_2_131 146738 147928 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_1843_2 HRGMv2_1843_2_132 147921 148904 - 5.A.3.3.2
TC HRGMv2_1843_2 HRGMv2_1843_2_133 148908 150032 - 3.D.7.2.2
pfam HRGMv2_1843_2 HRGMv2_1843_2_134 150821 151357 + Ni_hydr_CYTB
CAZyme HRGMv2_1843_2 HRGMv2_1843_2_135 151556 153859 + GH3
NULL(UNKNOWN) HRGMv2_1843_2 HRGMv2_1843_2_136 153986 154141 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_1843_2 HRGMv2_1843_2_137 154231 155688 - 3.D.1.1.1
TC HRGMv2_1843_2 HRGMv2_1843_2_138 155695 157218 - 3.D.1.1.1
TC HRGMv2_1843_2 HRGMv2_1843_2_139 157299 159143 - 3.D.1.1.1
TC HRGMv2_1843_2 HRGMv2_1843_2_140 159140 159442 - 3.D.1.1.1
TC HRGMv2_1843_2 HRGMv2_1843_2_141 159439 160011 - 3.D.1.1.1
TC HRGMv2_1843_2 HRGMv2_1843_2_142 160022 160564 - 3.D.1.1.1
TC HRGMv2_1843_2 HRGMv2_1843_2_143 160585 161559 - 3.D.1.1.1
TC HRGMv2_1843_2 HRGMv2_1843_2_144 161556 164291 - 3.D.1.1.1
TC HRGMv2_1843_2 HRGMv2_1843_2_145 164353 165699 - 3.D.1.1.1
TC HRGMv2_1843_2 HRGMv2_1843_2_146 165696 166196 - 3.D.1.1.1
TC HRGMv2_1843_2 HRGMv2_1843_2_147 166199 167995 - 3.D.1.1.1
TC HRGMv2_1843_2 HRGMv2_1843_2_148 168096 168770 - 3.D.1.1.1
TC HRGMv2_1843_2 HRGMv2_1843_2_149 168825 169265 - 3.D.1.1.1
TF HRGMv2_1843_2 HRGMv2_1843_2_150 169879 170808 - HTH_1
TC HRGMv2_1843_2 HRGMv2_1843_2_151 171200 171874 - 9.B.27.1.2
Gene ID: HRGMv2_1843_2_129
Type: TC
Location: 144544 - 145038 (-)
Gene ID: HRGMv2_1843_2_130
Type: TC
Location: 145038 - 146741 (-)
Gene ID: HRGMv2_1843_2_131
Type:
Location: 146738 - 147928 (-)
Gene ID: HRGMv2_1843_2_132
Type: TC
Location: 147921 - 148904 (-)
Gene ID: HRGMv2_1843_2_133
Type: TC
Location: 148908 - 150032 (-)
Gene ID: HRGMv2_1843_2_134
Type: pfam
Location: 150821 - 151357 (+)
Gene ID: HRGMv2_1843_2_135
Type: CAZyme
Location: 151556 - 153859 (+)
Gene ID: HRGMv2_1843_2_136
Type:
Location: 153986 - 154141 (+)
Gene ID: HRGMv2_1843_2_137
Type: TC
Location: 154231 - 155688 (-)
Gene ID: HRGMv2_1843_2_138
Type: TC
Location: 155695 - 157218 (-)
Gene ID: HRGMv2_1843_2_139
Type: TC
Location: 157299 - 159143 (-)
Gene ID: HRGMv2_1843_2_140
Type: TC
Location: 159140 - 159442 (-)
Gene ID: HRGMv2_1843_2_141
Type: TC
Location: 159439 - 160011 (-)
Gene ID: HRGMv2_1843_2_142
Type: TC
Location: 160022 - 160564 (-)
Gene ID: HRGMv2_1843_2_143
Type: TC
Location: 160585 - 161559 (-)
Gene ID: HRGMv2_1843_2_144
Type: TC
Location: 161556 - 164291 (-)
Gene ID: HRGMv2_1843_2_145
Type: TC
Location: 164353 - 165699 (-)
Gene ID: HRGMv2_1843_2_146
Type: TC
Location: 165696 - 166196 (-)
Gene ID: HRGMv2_1843_2_147
Type: TC
Location: 166199 - 167995 (-)
Gene ID: HRGMv2_1843_2_148
Type: TC
Location: 168096 - 168770 (-)
Gene ID: HRGMv2_1843_2_149
Type: TC
Location: 168825 - 169265 (-)
Gene ID: HRGMv2_1843_2_150
Type: TF
Location: 169879 - 170808 (-)
Gene ID: HRGMv2_1843_2_151
Type: TC
Location: 171200 - 171874 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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