Cluster: HRGMv2_1832_CGC6
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_1832
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_1832_13 | HRGMv2_1832_13_32 | 32088 | 33185 | - | GT28 |
| TC | HRGMv2_1832_13 | HRGMv2_1832_13_33 | 33203 | 34327 | - | 2.A.103.1.1 |
| pfam | HRGMv2_1832_13 | HRGMv2_1832_13_34 | 34327 | 35667 | - | Mur_ligase_C | Mur_ligase_M | MurD-like_N |
| TC | HRGMv2_1832_13 | HRGMv2_1832_13_35 | 35688 | 36725 | - | 9.B.146.1.6 |
Gene ID: HRGMv2_1832_13_32
Type: CAZyme
Location: 32088 - 33185 (-)
Type: CAZyme
Location: 32088 - 33185 (-)
Gene ID: HRGMv2_1832_13_33
Type: TC
Location: 33203 - 34327 (-)
Type: TC
Location: 33203 - 34327 (-)
Gene ID: HRGMv2_1832_13_34
Type: pfam
Location: 34327 - 35667 (-)
Type: pfam
Location: 34327 - 35667 (-)
Gene ID: HRGMv2_1832_13_35
Type: TC
Location: 35688 - 36725 (-)
Type: TC
Location: 35688 - 36725 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Succinivibrionaceae
Genus
Succinivibrio
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.