dbCAN Logo

Cluster: HRGMv2_1832_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1832_8 HRGMv2_1832_8_12 13350 15887 - GH31_2
TC HRGMv2_1832_8 HRGMv2_1832_8_13 15936 17237 - 2.A.56.1.5
TC HRGMv2_1832_8 HRGMv2_1832_8_14 17234 17737 - 2.A.56.1.6
TC HRGMv2_1832_8 HRGMv2_1832_8_15 17740 18768 - 2.A.56.1.5
CAZyme HRGMv2_1832_8 HRGMv2_1832_8_16 18820 21324 - GH31_2
TF HRGMv2_1832_8 HRGMv2_1832_8_17 21484 22314 + HTH_AraC | HTH_AraC
TC HRGMv2_1832_8 HRGMv2_1832_8_18 22408 23502 - 3.A.1.2.5
TC HRGMv2_1832_8 HRGMv2_1832_8_19 23669 26317 - 3.A.7.7.1
TC HRGMv2_1832_8 HRGMv2_1832_8_20 26344 27561 - 8.A.21.2.4
Gene ID: HRGMv2_1832_8_12
Type: CAZyme
Location: 13350 - 15887 (-)
Gene ID: HRGMv2_1832_8_13
Type: TC
Location: 15936 - 17237 (-)
Gene ID: HRGMv2_1832_8_14
Type: TC
Location: 17234 - 17737 (-)
Gene ID: HRGMv2_1832_8_15
Type: TC
Location: 17740 - 18768 (-)
Gene ID: HRGMv2_1832_8_16
Type: CAZyme
Location: 18820 - 21324 (-)
Gene ID: HRGMv2_1832_8_17
Type: TF
Location: 21484 - 22314 (+)
Gene ID: HRGMv2_1832_8_18
Type: TC
Location: 22408 - 23502 (-)
Gene ID: HRGMv2_1832_8_19
Type: TC
Location: 23669 - 26317 (-)
Gene ID: HRGMv2_1832_8_20
Type: TC
Location: 26344 - 27561 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List