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Cluster: HRGMv2_1832_CGC17

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1832_61 HRGMv2_1832_61_1 285 1823 + 3.D.2.1.1
TC HRGMv2_1832_61 HRGMv2_1832_61_2 1839 3281 + 3.D.2.1.1
TC HRGMv2_1832_61 HRGMv2_1832_61_3 3431 3997 - 4.A.1.1.15
TC HRGMv2_1832_61 HRGMv2_1832_61_4 4026 5690 - 4.A.2.1.17
TC HRGMv2_1832_61 HRGMv2_1832_61_5 5692 6459 - 2.A.121.1.3
pfam HRGMv2_1832_61 HRGMv2_1832_61_6 6803 7585 + ZipA_C
pfam HRGMv2_1832_61 HRGMv2_1832_61_7 7706 9781 + BRCT | DNA_ligase_aden | DNA_ligase_ZBD | DNA_ligase_OB | PTCB-BRCT | HHH_2 | HHH_5
CAZyme HRGMv2_1832_61 HRGMv2_1832_61_8 9879 10904 - GH23
Gene ID: HRGMv2_1832_61_1
Type: TC
Location: 285 - 1823 (+)
Gene ID: HRGMv2_1832_61_2
Type: TC
Location: 1839 - 3281 (+)
Gene ID: HRGMv2_1832_61_3
Type: TC
Location: 3431 - 3997 (-)
Gene ID: HRGMv2_1832_61_4
Type: TC
Location: 4026 - 5690 (-)
Gene ID: HRGMv2_1832_61_5
Type: TC
Location: 5692 - 6459 (-)
Gene ID: HRGMv2_1832_61_6
Type: pfam
Location: 6803 - 7585 (+)
Gene ID: HRGMv2_1832_61_7
Type: pfam
Location: 7706 - 9781 (+)
Gene ID: HRGMv2_1832_61_8
Type: CAZyme
Location: 9879 - 10904 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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