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Cluster: HRGMv2_1832_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1832_49 HRGMv2_1832_49_2 2959 4758 + 9.B.34.1.2
pfam HRGMv2_1832_49 HRGMv2_1832_49_3 4920 5546 - DctQ
TC HRGMv2_1832_49 HRGMv2_1832_49_4 5557 6849 - 2.A.56.1.6
TC HRGMv2_1832_49 HRGMv2_1832_49_5 6951 7946 - 2.A.56.1.2
pfam HRGMv2_1832_49 HRGMv2_1832_49_6 8036 8968 - DHDPS
TC HRGMv2_1832_49 HRGMv2_1832_49_7 9048 10541 - 2.A.80.1.1
pfam HRGMv2_1832_49 HRGMv2_1832_49_8 10544 11017 - TctB
pfam HRGMv2_1832_49 HRGMv2_1832_49_9 11035 11997 - TctC
CAZyme HRGMv2_1832_49 HRGMv2_1832_49_10 12026 13039 - GH33
Gene ID: HRGMv2_1832_49_2
Type: TC
Location: 2959 - 4758 (+)
Gene ID: HRGMv2_1832_49_3
Type: pfam
Location: 4920 - 5546 (-)
Gene ID: HRGMv2_1832_49_4
Type: TC
Location: 5557 - 6849 (-)
Gene ID: HRGMv2_1832_49_5
Type: TC
Location: 6951 - 7946 (-)
Gene ID: HRGMv2_1832_49_6
Type: pfam
Location: 8036 - 8968 (-)
Gene ID: HRGMv2_1832_49_7
Type: TC
Location: 9048 - 10541 (-)
Gene ID: HRGMv2_1832_49_8
Type: pfam
Location: 10544 - 11017 (-)
Gene ID: HRGMv2_1832_49_9
Type: pfam
Location: 11035 - 11997 (-)
Gene ID: HRGMv2_1832_49_10
Type: CAZyme
Location: 12026 - 13039 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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